![]() ![]() Adobe Acrobat or another strong PDF editor * ask Thomas for all modelling & docking software and questions note a list of FOSS Molecular Modelling software here Other Software Docking: options include Vina (or older Autodock Vina) or DOCK 6 from UCSF. ![]() Molecular Modelling: software for doing geometry calculations - easiest probably Avogadro and/or ChemAxon's Marvin Sketch also Ghemical (Mopac based). For PyMol you can find many install guides online, or use a precompiled build like MacPyMol. Structure Viewing: Chimera / since 2018 ChimeraX: a free great protein-ligand viewer that is now better than PyMol and is easier to install. Affinity Designer (cheaper better version of Illustrator) is a strong vector graphics creator with layer handling. No graphs made in Excel! Julia administers the licences. Makes high quality vectorial pdf graphs without fuss, do analysis, copy-paste formatting. We have licences for graphing software Prism (Mac/Win). LMU provides licences for Mestrenova (get licence file mestrelicnew.zip from labmate or Veith directly), ChemDraw (use LMU email address to register get CD16 locally), VPN setup certificates, and for other scientific programs you want (see list at the CUP Intranet). Paying Software that we have licences for (see also CUP-Software List): ![]() Try Control Panel / Sound / Playback / Headset_or_Earphones / Levels: un-mute Line-In and raise the level (some delay) or else installing two extra programmes. NB default “ambient noise reduction” (in System Preferences / Sound / Input) adds 20 ms time delay so optionally unclick that. Sign in with your LMU-user through the LMU Zoom portal for full features.įor own-microphone-to-earphones audio feedback: Mac: use Audio Monitor (use option+rightclick for first run). The CIP Pool computer room (C1) has computers with full scientific software installed and ready to use (calculations etc). Learn & match up to the Using Software guidelines (has more details on common software). TextEdit or Notepad++ instead of Word a good browser ie Chrome, Opera, or Firefox instead of the default a light PDF reader (Mac Preview, Win Foxit) instead of Acrobat Reader to handle. Thunderbird, or Mail reference manager Zotero a light text editor eg. What You Need to be Actively Using: an email client eg. Banned from use at/for work: Endnote & Citavi Adobe Illustrator jpgs nonvectorial picture formats containing text. Zotero connector, or the LRZ's pac file if you prefer. For browser proxy auto-config (for journal redirection) use eg. +Browser: Create bookmarks in your browsers for EZProxy (to access all papers) and for CAS-based chemical buying shortcuts. +Online Accounts: setup group Google account on computer & phone (talks/meetings calendars reagent ordering & contact details spreadsheets). +Smartphone: Researcher, and allow it to login through LMU to get full paper access. +Win: Thunderbird (good email client LMU setup guide here) Notepad++ Foxit PDF Reader 7zip. +Mac: Handbrake Paintbrush TheUnarchiver HomeBrew AppCleaner. +Recommended: Notion (note-taking and so much more). +ChemLab: MestreNova (! v.14.1.1 only) TeamViewer (for HPLC-MS) get Open E-nventory chem e-labbook from OTS. flowingsoftware on Win FlowJo on Mac) Arduino get a Benchling bio e-labbook from JA. For the Mail app on Mac, check your IMAP if you can't search properly.Įveryone: ChemDraw19 Prism6/8 Chimera or ChimeraX (replaces PyMol) FIJI (replaces ImageJ) Office (!set all to default English, and decimal point for Excel load group templates) Zotero (plus Word plugin and browser Connector) Chrome, Opera, or Firefox browser plugins for ChemDraw Slack (add group channel) DropBox Client and LRZ Sync'n'Share Client (add both group fileshare systems) FreeFileSync eduVPN FileZilla Affinity Designer (or free Inkscape) instead of Adobe Illustrator Adobe Acrobat or a strong PDF editor VLC. See LMU IT Accounts page to get and set up Mail, VPN, Proxy etc. Install everything & ask IT guy / labmates if you have issues:īasics: Set operating system and all software to UK English for language and for number format (decimal point as default, not German comma) set location to Germany, currency to €, keyboard to German, date format yyyyMMdd, time format 24h, etc. Quickstart:Software you need to work in our group. ![]()
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